splinkr_records: Read speciesLink datasets

In cadubio/splinkr: Connect R environment to speciesLink network

Description

This function returns the search results from speciesLink network records.

Usage

splinkr_records(
  scientificName = NULL,
  barcode = NULL,
  catalogNumber = NULL,
  basisOfRecord = NULL,
  collectionCode = NULL,
  collector = NULL,
  collectorNumber = NULL,
  yearCollected = NULL,
  identifiedBy = NULL,
  yearIdentified = NULL,
  kingdom = NULL,
  phylum = NULL,
  class = NULL,
  order = NULL,
  family = NULL,
  typus = NULL,
  country = NULL,
  stateProvince = NULL,
  county = NULL,
  locality = NULL,
  redlist = NULL,
  maxrecords = NULL
)

Arguments

scientificName	Character vector containing one or more single or compound names, without authors
barcode	Character vector containing one or more institution barcode
catalogNumber	Character vector containing one or more institution catolog number
basisOfRecord	PreservedSpecimen, LivingSpecimen, FossilSpecimen, HumanObservation, MachineObservation, MaterialSample
collectionCode	Character vector containing collections or subcollections acronym
collector	Character vector containing one or more colletor name
collectorNumber	Character vector containing collector number
yearCollected	Numeric four-digits collect year
identifiedBy	Character vector identificator name
yearIdentified	Numeric four-digits year of identifications
kingdom	Character vector containing kingdon name
phylum	Character vector containing phyllum name
class	Character vector containing class name
order	Character vector containing order name
family	Character vector containing family name
typus	If "yes" search only in type material variable
country	Character vector containing collect country
stateProvince	Character vector containing state
county	Character vector containing collect county or city
locality	Character vector containingcollect locality
redlist	If "yes" return only taxa in Portaria MMA 443/2014
maxrecords	Character vector to restrict number of records to return

Value

data.frame() with the records

Examples

## Not run: 
# Searching taxon
splinkr_records(scientificName = "Dyckia encholirioides var. rubra")

# Searching taxa collected by collector...
splinkr_records(scientificName = c("Anathallis kleinii",
                                   "Anathallis microphyta"),
                collector = "Siqueira")

# Searching all type specimens from
# one collection
splinkr_records(collectionCode = "FLOR", typus = "yes")

# two collections
splinkr_records(collectionCode = c("FLOR", "FURB"), typus = "yes")

## End(Not run)

cadubio/splinkr documentation built on Oct. 13, 2020, 8:36 p.m.