PrimerLabels: Example data showing the valid primer lable table

In cam315/barcodePrimer: A package to randomly generate barcoded primer set combinations without primer dimers

Description

A data frame containing 2 columns of primer identifiers (Note, not the sequence of barcode or barcoded primer itself). The first and second columns represent forward and reverse primers, respectively. The forward primer labels must end with 'forward' or 'for' (case insensitive), connected other info with '_' or '-', e.g. 'Uni515-10-For'. The reverse follows similar format, ending with 'reverse' or 'rev'.

Usage

data("PrimerLabels")

Format

A data frame with 2 columns and 96 rows, each row represent the identifier of barcoded primer.

Forward

a character vector

Reverse

a character vector

Details

The identifiers in this example come from a custom dataset, amongst 'Uni515' represent universal bacterial primer starting at position 515, and 'Uni806' denotes that the universal bacterial primer with position 806.

Examples

data(PrimerLabels)
names(PrimerLabels)
dim(PrimerLabels)

cam315/barcodePrimer documentation built on Dec. 9, 2020, 7:01 p.m.