reparser: Parse the report of barcoded-primer to get primer...

In cam315/barcodePrimer: A package to randomly generate barcoded primer set combinations without primer dimers

Description

This function will parse the primer-check report generated by webtool 'Multiple Primer Analyzer' from Thermo Fisher Scientific, and extract the primer combinations with cross dimers.

Usage

reparser(repfile)

Arguments

repfile

argument specify the report file. It can be a file handle (name) or a report file which have been read into.

Value

this function will return a two-column data frame, each row will a be primer combination with cross dimers.

Author(s)

Sizhong Yang <[e-mail]>

Examples

data(report)

wcomb = reparser(repfile = report)
dim(wcomb)
head(wcomb)

cam315/barcodePrimer documentation built on Dec. 9, 2020, 7:01 p.m.