API for camilleroquencourt/ptairMS
Pre-processing PTR-TOF-MS Data
| Global functions | |
|---|---|
| .annotate | Source code |
| .checkTableFormat | Source code |
| .drawImage | Source code |
| .drawScale | Source code |
| .findAtom | Source code |
| .formula2mass | Source code |
| .loadVocDB | Source code |
| .palette | Source code |
| .prettyAxis | Source code |
| FindEqualLess | Source code |
| GCV | Source code |
| LocalMaximaSG | Man page Source code |
| OptimalWindowsSG | Man page Source code |
| PeakList | Man page |
| PeakList,ptrRaw-method | Man page |
| RunShinnyApp | Man page Source code |
| TransmissionCurve | Man page Source code |
| adduct | Source code |
| aggregate | Man page Source code |
| aggregateTemporalFile | Source code |
| align | Man page Source code |
| alignCalibrationPeak | Source code |
| alignSamples | Man page |
| alignSamples,ptrSet-method | Man page |
| alignSamplesFunc | Source code |
| annotateVOC | Man page |
| annotateVOC,ExpressionSet-method | Man page |
| annotateVOC,data.frame-method | Man page |
| annotateVOC,numeric-method | Man page |
| asymGauss | Source code |
| asymGaussInv | Source code |
| averageInv | Source code |
| averagePeak | Source code |
| averagePeakInv | Source code |
| bakgroundDetect | Source code |
| baselineEstimation | Source code |
| baselineEstimation2D | Source code |
| calibration | Man page |
| calibration,ptrRaw-method | Man page |
| calibration,ptrSet-method | Man page |
| calibrationFun | Man page Source code |
| changeTimeLimits | Man page Source code |
| checkSet | Source code |
| computeTemporalFile | Source code |
| convert_to_mzML | Man page Source code |
| createPtrSet | Man page Source code |
| cumulative_fit_function | Man page Source code |
| deadTimeCorr | Man page Source code |
| deconv2d2linearIndependant | Source code |
| deconv2dLinearCoupled | Source code |
| defineKnots | Man page |
| defineKnots,ptrRaw-method | Man page |
| defineKnots,ptrSet-method | Man page |
| defineKnotsExpiration | Source code |
| defineKnotsFunc | Source code |
| detectPeak | Man page |
| detectPeak,ptrRaw-method | Man page |
| detectPeak,ptrSet-method | Man page |
| determinePeakShape | Man page Source code |
| estimateResol | Source code |
| exportSampleMetada | Man page Source code |
| extractEIC | Man page Source code |
| findEqualGreaterM | Source code |
| findIsotope | Source code |
| findLimDensity | Source code |
| fitPeak | Source code |
| fit_averagePeak | Man page Source code |
| fit_averagePeak_function | Man page Source code |
| fliterEset | Source code |
| formula2mass | Man page Source code |
| getDirectory | Man page Source code |
| getFileNames | Man page |
| getFileNames,ptrRaw-method | Man page |
| getFileNames,ptrSet-method | Man page |
| getPeakList | Man page Source code |
| getSampleMetadata | Man page Source code |
| importSampleMetadata | Man page Source code |
| impute | Man page Source code |
| imputeFunc | Source code |
| imputeMat | Man page Source code |
| imputeRaw | Source code |
| initializeFit | Man page Source code |
| is_outlier | Source code |
| isotopeMzMatching | Source code |
| makeSubGroup | Man page Source code |
| mzToTof | Source code |
| overlapDedect | Source code |
| peakListNominalMass | Source code |
| plot,ptrSet,ANY-method | Man page |
| plot,ptrSet-method | Man page |
| plot.ptrSet | Man page |
| plotCalib | Man page |
| plotCalib,ptrRaw-method | Man page |
| plotCalib,ptrSet-method | Man page |
| plotCalibError | Source code |
| plotFeatures | Man page |
| plotFeatures,ptrSet-method | Man page |
| plotPeakRaw | Source code |
| plotPeakShape | Man page Source code |
| plotPeakShapeTof | Source code |
| plotPtrReaction | Source code |
| plotRaw | Man page |
| plotRaw,ptrRaw-method | Man page |
| plotRaw,ptrSet-method | Man page |
| plotResolution | Source code |
| plotTIC | Man page |
| plotTIC,ptrRaw-method | Man page |
| plotTIC,ptrSet-method | Man page |
| ppbConvert | Source code |
| processFileTemporal | Source code |
| processFileTemporalNominalMass | Source code |
| ptairMS | Man page |
| ptairMS-package | Man page |
| ptrRaw-class | Man page |
| ptrSet-class | Man page |
| readRaw | Man page Source code |
| resetSampleMetadata | Man page Source code |
| rmPeakList | Man page Source code |
| score_plotly | Source code Source code |
| sech2 | Source code |
| sech2Inv | Source code |
| setSampleMetadata | Man page Source code |
| show,ptrRaw-method | Man page |
| show,ptrSet-method | Man page |
| snipBase | Man page Source code |
| timeLimitFun | Source code |
| timeLimits | Man page |
| timeLimits,ptrRaw-method | Man page |
| timeLimits,ptrSet-method | Man page |
| tofToMz | Source code |
| updatePtrSet | Man page Source code |
| validateGroup | Source code |
| width | Man page Source code |
| writeEset | Man page |
| writeEset,ExpressionSet-method | Man page |
