API for camilleroquencourt/ptairMS
Pre-processing PTR-TOF-MS Data

Global functions
.annotate Source code
.checkTableFormat Source code
.drawImage Source code
.drawScale Source code
.findAtom Source code
.formula2mass Source code
.loadVocDB Source code
.palette Source code
.prettyAxis Source code
FindEqualLess Source code
GCV Source code
LocalMaximaSG Man page Source code
OptimalWindowsSG Man page Source code
PeakList Man page
PeakList,ptrRaw-method Man page
RunShinnyApp Man page Source code
TransmissionCurve Man page Source code
adduct Source code
aggregate Man page Source code
aggregateTemporalFile Source code
align Man page Source code
alignCalibrationPeak Source code
alignSamples Man page
alignSamples,ptrSet-method Man page
alignSamplesFunc Source code
annotateVOC Man page
annotateVOC,ExpressionSet-method Man page
annotateVOC,data.frame-method Man page
annotateVOC,numeric-method Man page
asymGauss Source code
asymGaussInv Source code
averageInv Source code
averagePeak Source code
averagePeakInv Source code
bakgroundDetect Source code
baselineEstimation Source code
baselineEstimation2D Source code
calibration Man page
calibration,ptrRaw-method Man page
calibration,ptrSet-method Man page
calibrationFun Man page Source code
changeTimeLimits Man page Source code
checkSet Source code
computeTemporalFile Source code
convert_to_mzML Man page Source code
createPtrSet Man page Source code
cumulative_fit_function Man page Source code
deadTimeCorr Man page Source code
deconv2d2linearIndependant Source code
deconv2dLinearCoupled Source code
defineKnots Man page
defineKnots,ptrRaw-method Man page
defineKnots,ptrSet-method Man page
defineKnotsExpiration Source code
defineKnotsFunc Source code
detectPeak Man page
detectPeak,ptrRaw-method Man page
detectPeak,ptrSet-method Man page
determinePeakShape Man page Source code
estimateResol Source code
exportSampleMetada Man page Source code
extractEIC Man page Source code
findEqualGreaterM Source code
findIsotope Source code
findLimDensity Source code
fitPeak Source code
fit_averagePeak Man page Source code
fit_averagePeak_function Man page Source code
fliterEset Source code
formula2mass Man page Source code
getDirectory Man page Source code
getFileNames Man page
getFileNames,ptrRaw-method Man page
getFileNames,ptrSet-method Man page
getPeakList Man page Source code
getSampleMetadata Man page Source code
importSampleMetadata Man page Source code
impute Man page Source code
imputeFunc Source code
imputeMat Man page Source code
imputeRaw Source code
initializeFit Man page Source code
is_outlier Source code
isotopeMzMatching Source code
makeSubGroup Man page Source code
mzToTof Source code
overlapDedect Source code
peakListNominalMass Source code
plot,ptrSet,ANY-method Man page
plot,ptrSet-method Man page
plot.ptrSet Man page
plotCalib Man page
plotCalib,ptrRaw-method Man page
plotCalib,ptrSet-method Man page
plotCalibError Source code
plotFeatures Man page
plotFeatures,ptrSet-method Man page
plotPeakRaw Source code
plotPeakShape Man page Source code
plotPeakShapeTof Source code
plotPtrReaction Source code
plotRaw Man page
plotRaw,ptrRaw-method Man page
plotRaw,ptrSet-method Man page
plotResolution Source code
plotTIC Man page
plotTIC,ptrRaw-method Man page
plotTIC,ptrSet-method Man page
ppbConvert Source code
processFileTemporal Source code
processFileTemporalNominalMass Source code
ptairMS Man page
ptairMS-package Man page
ptrRaw-class Man page
ptrSet-class Man page
readRaw Man page Source code
resetSampleMetadata Man page Source code
rmPeakList Man page Source code
score_plotly Source code Source code
sech2 Source code
sech2Inv Source code
setSampleMetadata Man page Source code
show,ptrRaw-method Man page
show,ptrSet-method Man page
snipBase Man page Source code
timeLimitFun Source code
timeLimits Man page
timeLimits,ptrRaw-method Man page
timeLimits,ptrSet-method Man page
tofToMz Source code
updatePtrSet Man page Source code
validateGroup Source code
width Man page Source code
writeEset Man page
writeEset,ExpressionSet-method Man page
camilleroquencourt/ptairMS documentation built on June 9, 2024, 10:35 a.m.