Files in canfielder/CausalityExtraction

Hypothesis Extraction and Analysis for Scholarly Papers in Social Sciences

.Rbuildignore

.Rprofile

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.gitignore

DESCRIPTION

HypothesisReader.Rproj

LICENSE

LICENSE.md

NAMESPACE

R/app.R R/app_functions.R R/casuality.R R/direction.R R/entity.R R/execute.R R/hypothesis.R R/install.R R/shared_causality_direction.R

R/sysdata.rda

R/text.R R/utils-pipe.R R/utils.R R/zzz.R README.md data-raw/DATASET.R data-raw/internal_system_data.Rmd

data-raw/italic_conversion_error_table.csv

inst/encoding_error_table_generation.Rmd

inst/extdata/models/causality.joblib

inst/extdata/models/direction.joblib

inst/extdata/models/entity_extraction/saved_model.pb

inst/extdata/models/entity_extraction/variables/variables.data-00000-of-00001

inst/extdata/models/entity_extraction/variables/variables.index

inst/extdata/models/fasttext_model.bin

inst/extdata/sample_documents/10.1.1.126.2347.pdf inst/extdata/sample_documents/1614.full.pdf inst/extdata/sample_documents/A16JOM.pdf inst/extdata/sample_documents/AA17JOM.pdf inst/extdata/sample_documents/AG01JAP.pdf inst/extdata/sample_documents/AMW07JAP.pdf inst/extdata/sample_documents/BFM04AMJ.pdf inst/extdata/sample_documents/CVT18JWB.pdf inst/extdata/sample_documents/DS16IBR.pdf inst/extdata/sample_documents/HO17AS.pdf inst/extdata/sample_documents/HP16MIR.pdf inst/extdata/sample_documents/Haratio_Morgan_2018.pdf inst/extdata/sample_documents/IBR_2019_206_Original_V0.pdf inst/extdata/sample_documents/Kish-Gephart_Campbell_2015_AMJ.pdf inst/extdata/sample_documents/Kulchina_2016_SMJ.pdf inst/extdata/sample_documents/Kulchina_2018_SMJ.pdf inst/extdata/sample_documents/Kulchina_Oxley_WP.pdf inst/extdata/sample_documents/LMHH12AMJ.pdf inst/extdata/sample_documents/Tilcsik_2014_ASQ.pdf inst/extdata/sample_documents/a94amj.pdf inst/extdata/sample_documents/adg08hrm.pdf inst/extdata/sample_documents/amr.2018.0072.pdf inst/extdata/sample_documents/azw06meq.pdf inst/extdata/sample_documents/b99ilr.pdf inst/extdata/sample_documents/bb95jibs.pdf inst/extdata/sample_documents/bc11amj.pdf inst/extdata/sample_documents/bl00aeam.pdf inst/extdata/sample_documents/bm05jbe.pdf inst/extdata/sample_documents/bp04beer.pdf inst/extdata/sample_documents/bs05jams.pdf inst/extdata/sample_documents/bss03amj.pdf inst/extdata/sample_documents/ces06ee.pdf inst/extdata/sample_documents/cg05smj.pdf inst/extdata/sample_documents/ck99smj.pdf inst/extdata/sample_documents/cl10pp.pdf inst/extdata/sample_documents/cs06amj.pdf inst/extdata/sample_documents/jv04amj.pdf inst/extdata/sample_documents/kyr11ijsom.pdf inst/extdata/sample_documents/lcy12ijebm.pdf inst/extdata/sample_documents/ms10jbe.pdf inst/extdata/sample_documents/pwr09amj.pdf inst/extdata/sample_documents/smj2519.pdf inst/extdata/sample_documents/ss98jbe.pdf inst/extdata/sample_documents/tbbc09halmstaduniversity.pdf inst/extdata/sample_documents/wq11amj.pdf inst/model_development/README.md

inst/model_development/data/input/causality_extraction_2021-02-27 -human_validation_and_correction.xlsx

inst/model_development/data/input/causality_extraction_2021-02-27 -human_validation_and_correction_erc.xlsx

inst/model_development/data/input/training_data_dir_multiclass.xlsx

inst/model_development/data/output/causality_direction/causality.joblib

inst/model_development/data/output/causality_direction/causality_direction_evaluation.csv

inst/model_development/data/output/causality_direction/direction.joblib

inst/model_development/data/output/causality_direction/test_data_causality.csv

inst/model_development/data/output/causality_direction/test_data_direction.csv

inst/model_development/data/output/entity_extraction/entity_extraction_evaluation_iter_1_20210305-210403.csv

inst/model_development/data/output/entity_extraction/entity_extraction_evaluation_iter_2_20210308-132504.csv

inst/model_development/data/output/entity_extraction/entity_extraction_evaluation_iter_3_20210309-105137.csv

inst/model_development/data/output/entity_extraction/entity_extraction_vs_keyword_split.csv

inst/model_development/notebooks/.ipynb_checkpoints/direction_classification_model_generation-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/direction_classification_model_verification-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/entity_extraction_grid_analysis-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/entity_extraction_grid_iter_1-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/entity_extraction_grid_iter_2-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/entity_extraction_grid_iter_3-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/entity_extraction_model_export-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/entity_extraction_three_variables-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/entity_extraction_vs_keyword_split-checkpoint.ipynb

inst/model_development/notebooks/.ipynb_checkpoints/source_entity_extraction-checkpoint.py

inst/model_development/notebooks/__pycache__/source_causality_direction.cpython-36.pyc

inst/model_development/notebooks/__pycache__/source_entity_extraction.cpython-36.pyc

inst/model_development/notebooks/direction_classification_model_generation.ipynb

inst/model_development/notebooks/direction_classification_model_verification.ipynb

inst/model_development/notebooks/entity_extraction_grid_analysis.ipynb

inst/model_development/notebooks/entity_extraction_grid_iter_1.ipynb

inst/model_development/notebooks/entity_extraction_grid_iter_2.ipynb

inst/model_development/notebooks/entity_extraction_grid_iter_3.ipynb

inst/model_development/notebooks/entity_extraction_model_export.ipynb

inst/model_development/notebooks/entity_extraction_three_variables.ipynb

inst/model_development/notebooks/entity_extraction_vs_keyword_split.ipynb

inst/model_development/notebooks/source_causality_direction.py

inst/model_development/notebooks/source_entity_extraction.py

inst/reticulate_setup.Rmd man/HypothesisReader.Rd man/InstallPythonPackages.Rd man/LaunchApp.Rd

renv.lock

renv/.gitignore

renv/activate.R

renv/settings.dcf

tests/general_notes.docx

tests/notebooks/causality_classification.Rmd

tests/notebooks/debugging/hypothesis_reader_2021-04-28.csv

tests/notebooks/entity_extraction_comparison/entity_extraction_comparison.Rmd

tests/notebooks/entity_extraction_comparison/entity_extraction_comparison.csv

tests/notebooks/entity_extraction_comparison/training_data_w_extracted_entities.csv

tests/notebooks/fasttext_lime.Rmd

tests/notebooks/python/Entity_Extraction_keras_modification.ipynb

tests/notebooks/reticulate_python_path_tests.Rmd tests/notebooks/sample_testing.Rmd tests/notebooks/save_python_models.Rmd tests/notebooks/setup_reticulate.Rmd tests/notebooks/verify_results/verify_causality_classification.Rmd

tests/notebooks/verify_results/verify_causality_classification.html

tests/notebooks/verify_results/verify_entity_extraction.Rmd

tests/notebooks/verify_results/verify_entity_extraction.html

tests/notebooks/walkthrough/testing_causality_classification.Rmd

tests/notebooks/walkthrough/testing_compiled.html

tests/notebooks/walkthrough/testing_entity_extraction.Rmd

tests/notebooks/walkthrough/testing_entity_extraction.html

tests/notebooks/walkthrough/testing_hypothesis_extraction.Rmd

tests/notebooks/walkthrough/testing_hypothesis_extraction.html

tests/notebooks/walkthrough/testing_hypothesis_extraction_fasttext.Rmd tests/notebooks/walkthrough/testing_pdf_to_text.Rmd tests/notebooks/walkthrough/wt_causality_direction.Rmd tests/notebooks/walkthrough/wt_entity.Rmd tests/notebooks/walkthrough/wt_entity_model_storage.Rmd tests/notebooks/walkthrough/wt_execute_complete_process.Rmd tests/notebooks/walkthrough/wt_hypothesis.Rmd tests/notebooks/walkthrough/wt_misc.Rmd tests/notebooks/walkthrough/wt_text.Rmd tests/notebooks/walkthrough/wt_text_batch.Rmd

canfielder/CausalityExtraction documentation built on Jan. 5, 2022, 10:55 a.m.