NOMAD-package: ANOVA normalization of MS iTRAQ peptide abundances
In carlmurie/NOMAD: Normalization of Mass Spectrometry Data
Description
Details
Author(s)
References
Description
This package contains functions for performing an ANOVA normalization
method to MS iTRAQ peptide abundances and assembling protein abundances.
Details
Package: NOMAD
Type: Package
Version: 1.0
Date: 2015-01-15
License: GPL (>=2)
nomadNormalization ApplyANOVA normalization to peptide abundances
nomadAssembleProteins Assemble protein abundances from peptide
abundances
nomadCheckBias Visualize bias of a particular factor
nomadCheckLogTransform Visualize effect of logging on homogeneity of variance
Author(s)
Carl Murie
Maintainer: Carl Murie <carl.murie@ki.se>
References
Hill,E.G. et al. (2008) A Statistical Model for iTRAQ Data Analysis. J. Proteome Res., 7, 3091-3101.
Oberg,A.L. et al. (2008) Statistical Analysis of Relative Labeled Mass Spectrometry Data from Complex Samples Using ANOVA. J. Proteome Res., 7, 225-233.
carlmurie/NOMAD documentation built on May 14, 2019, 11:12 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Details Author(s) References
Description
This package contains functions for performing an ANOVA normalization method to MS iTRAQ peptide abundances and assembling protein abundances.
Details
| Package: | NOMAD |
| Type: | Package |
| Version: | 1.0 |
| Date: | 2015-01-15 |
| License: | GPL (>=2) |
nomadNormalization ApplyANOVA normalization to peptide abundances nomadAssembleProteins Assemble protein abundances from peptide abundances nomadCheckBias Visualize bias of a particular factor nomadCheckLogTransform Visualize effect of logging on homogeneity of variance
Author(s)
Carl Murie
Maintainer: Carl Murie <carl.murie@ki.se>
References
Hill,E.G. et al. (2008) A Statistical Model for iTRAQ Data Analysis. J. Proteome Res., 7, 3091-3101. Oberg,A.L. et al. (2008) Statistical Analysis of Relative Labeled Mass Spectrometry Data from Complex Samples Using ANOVA. J. Proteome Res., 7, 225-233.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.