API for carmonalab/STACAS
STACAS: Sub-Type Anchoring Correction for Alignment in Seurat
| Global functions | |
|---|---|
| AddDatasetID.2 | Source code |
| AdjustSampleTree.Seurat | Source code |
| CountAnchors.Seurat | Source code |
| FilterAnchors.Seurat | Source code |
| FindAnchorPairs.Seurat | Source code |
| FindAnchors.STACAS | Man page |
| FindAnchors.wdist | Source code |
| FindIntegrationAnchors.wdist | Source code |
| FindNN.Seurat | Source code |
| FindVariableFeatures.STACAS | Man page Source code |
| IntegrateData.STACAS | Man page Source code |
| MapQueryData.local | Source code |
| PairwiseIntegrateReference.STACAS | Source code |
| ParseMergePair.local | Source code |
| ParseRow | Source code |
| PlotAnchors.STACAS | Man page Source code |
| Run.STACAS | Man page |
| SampleTree.STACAS | Man page |
| ScoreAnchors.Seurat | Source code |
| StandardizeGeneSymbols | Man page Source code |
| Sweep | Source code |
| TopDimFeatures.Seurat | Source code |
| `%||%` | Source code |
| annotate.by.neighbors | Man page |
| check.genes | Source code |
| get.blocklist | Source code |
| inconsistent_anchors | Source code |
| logistic | Source code |
| probabilistic_reject | Source code |
| reweight_anchors | Source code |
| strength_function | Source code |
| threshold_from_percentile | Source code |
| weighted.Anchors.STACAS | Source code |
