Files in carter-allen/spruce
Spatial Random Effects Clustering of Single Cell Data
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
NAMESPACE
R/RcppExports.R
R/build_knn_graph.R
R/coords_df_sim.R
R/fit_msn.R
R/fit_msn_PG_smooth.R
R/fit_msn_smooth.R
R/fit_mvn.R
R/fit_mvn_MCAR.R
R/fit_mvn_PG.R
R/fit_mvn_PG_CAR.R
R/fit_mvn_PG_CAR_MCAR.R
R/fit_mvn_PG_CAR_MCAR_smooth.R
R/fit_mvn_PG_CAR_smooth.R
R/fit_mvn_PG_MCAR.R
R/fit_mvn_PG_MCAR_smooth.R
R/fit_mvn_PG_smooth.R
R/fit_mvn_smooth.R
R/fit_spruce.R
R/get_map.R
R/get_psi_sums.R
R/get_scores.R
R/plot_deltas.R
R/remap_canonical2.R
R/spruce-package.R
README.md
data/coords_df_sim.rda
man/build_knn_graph.Rd
man/coords_df_sim.Rd
man/fit_msn.Rd
man/fit_msn_PG_smooth.Rd
man/fit_msn_smooth.Rd
man/fit_mvn.Rd
man/fit_mvn_MCAR.Rd
man/fit_mvn_PG.Rd
man/fit_mvn_PG_CAR.Rd
man/fit_mvn_PG_CAR_MCAR.Rd
man/fit_mvn_PG_CAR_MCAR_smooth.Rd
man/fit_mvn_PG_CAR_smooth.Rd
man/fit_mvn_PG_MCAR.Rd
man/fit_mvn_PG_MCAR_smooth.Rd
man/fit_mvn_PG_smooth.Rd
man/fit_mvn_smooth.Rd
man/fit_spruce.Rd
man/get_map.Rd
man/get_psi_sums.Rd
man/get_scores.Rd
man/plot_deltas.Rd
man/psi_sums.Rd
man/remap_canonical2.Rd
man/spruce.Rd
src/Makevars
src/RcppExports.cpp
src/RcppExports.o
src/spruce.so
src/update_phi.cpp
src/update_phi.o
src/update_t.cpp
src/update_t.o
src/update_z.cpp
src/update_z.o
