API for cbg-ethz/perturbatr
Statistical Analysis of High-Throughput Genetic Perturbation Screens

Global functions
.check.formula Source code
.diffuse Source code
.do.mrw Source code
.gather.locfdr Source code
.ge.fdrs Source code
.get.graph Source code
.hm Source code
.hm.fit Source code
.hm.model.data Source code
.init.starting.distribution Source code
.localfdr Source code
.plot.bars Source code
.plot.bars.diff Source code
.plot.effect.matrices.perturbation.analysed.hm Source code
.plot.perturbation.hm.analysed Source code
.ranef Source code
.requiredDataCols Source code
.significance.mrw Source code
HMAnalysedPerturbationData-class Man page
NetworkAnalysedPerturbationData-class Man page
PerturbationData-class Man page
bootstrap Man page Source code
bootstrap.PerturbationData Source code
bootstrap.tbl_df Source code
check.columns Source code
colors Source code
conf.int Source code
dataSet Man page
dataSet,AbstractAnalysedPerturbationData-method Man page
dataSet,PerturbationData-method Man page
diffuse Man page
diffuse,HMAnalysedPerturbationData-method Man page
effect.matrices Source code
effect.matrices.HMAnalysedPerturbationData Source code
filter Man page Source code
filter.PerturbationData Source code
ge.fdrs Source code
geneEffects Man page
geneEffects,AbstractAnalysedPerturbationData-method Man page
graph Man page
graph,NetworkAnalysedPerturbationData-method Man page
hm Man page
hm,PerturbationData-method Man page
inference Man page
inference,AbstractAnalysedPerturbationData-method Man page
inferenceTypes Source code
isBootstrapped Man page
isBootstrapped,AbstractAnalysedPerturbationData-method Man page
leuniq Source code
modelFit Man page
modelFit,HMAnalysedPerturbationData-method Man page
mrw Source code
nestedGeneEffects Man page
nestedGeneEffects,HMAnalysedPerturbationData-method Man page
nge.fdrs Source code
params Man page
params,AbstractAnalysedPerturbationData-method Man page
perturbatr-package Man page
plot.HMAnalysedPerturbationData Source code
plot.NetworkAnalysedPerturbationData Man page Source code
plot.PerturbationData Man page Source code
rbind.PerturbationData Man page Source code
read.graph Source code
rnaiscreen Man page
setModelData Man page
setModelData,PerturbationData-method Man page
cbg-ethz/perturbatr documentation built on Oct. 26, 2019, 11:42 a.m.