NetworkData-methods: Networks data accessor for a CeTF class object.

In cbiagii/ceTF: Coexpression for Transcription Factors using Regulatory Impact Factors and Partial Correlation and Information Theory analysis

Networks data accessor for a CeTF class object.

Description

The networks accessor access the networks, key TFs and annotations for each gene and TF resulted from PCIT analysis and runAnalysis function analysis.

Usage

NetworkData(x, type = "network1")

## S4 method for signature 'CeTF'
NetworkData(x, type = "network1")

Arguments

x	CeTF-class object
type	Type of data: network1, network2, keytfs, tfs or annotation.The numbers 1 and 2 correspond to the respective condition (default: network1).

Value

Returns the Outputs used for RIF and PCIT.

See Also

runAnalysis.

Examples

# load the CeTF class object resulted from runAnalysis function
data(CeTFdemo)

NetworkData(CeTFdemo)

cbiagii/ceTF documentation built on Feb. 6, 2023, 9:05 p.m.