Files in ccchang0111/PAM50
Breast Cancer's PAM50 prediction based on patient's RNA-seq data

DESCRIPTION
NAMESPACE
R/PAM50.R R/data.R R/data_utils.R R/plot_utils.R
R/sysdata.rda
README.md
_pkgdown.yml
data/es.rda
docs/articles/PAM50_tutorial.html
docs/articles/PAM50_tutorial_files/crosstalk-1.0.0/css/crosstalk.css
docs/articles/PAM50_tutorial_files/crosstalk-1.0.0/js/crosstalk.js
docs/articles/PAM50_tutorial_files/crosstalk-1.0.0/js/crosstalk.js.map
docs/articles/PAM50_tutorial_files/crosstalk-1.0.0/js/crosstalk.min.js
docs/articles/PAM50_tutorial_files/crosstalk-1.0.0/js/crosstalk.min.js.map
docs/articles/PAM50_tutorial_files/datatables-binding-0.5/datatables.js
docs/articles/PAM50_tutorial_files/datatables-css-0.0.0/datatables-crosstalk.css
docs/articles/PAM50_tutorial_files/dt-core-1.10.16/css/jquery.dataTables.extra.css
docs/articles/PAM50_tutorial_files/dt-core-1.10.16/css/jquery.dataTables.min.css
docs/articles/PAM50_tutorial_files/dt-core-1.10.16/js/jquery.dataTables.min.js
docs/articles/PAM50_tutorial_files/figure-html/unnamed-chunk-8-1.png
docs/articles/PAM50_tutorial_files/figure-html/unnamed-chunk-9-1.png
docs/articles/PAM50_tutorial_files/htmlwidgets-1.3/htmlwidgets.js
docs/articles/PAM50_tutorial_files/jquery-1.12.4/LICENSE.txt
docs/articles/PAM50_tutorial_files/jquery-1.12.4/jquery.min.js
docs/articles/gPAM50_tutorial.html
docs/articles/gPAM50_tutorial_files/crosstalk-1.0.0/css/crosstalk.css
docs/articles/gPAM50_tutorial_files/crosstalk-1.0.0/js/crosstalk.js
docs/articles/gPAM50_tutorial_files/crosstalk-1.0.0/js/crosstalk.js.map
docs/articles/gPAM50_tutorial_files/crosstalk-1.0.0/js/crosstalk.min.js
docs/articles/gPAM50_tutorial_files/crosstalk-1.0.0/js/crosstalk.min.js.map
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/css/datatables-crosstalk.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/datatables.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/datatables.yaml
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/css/autoFill.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/css/autoFill.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/css/autoFill.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/css/autoFill.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/css/autoFill.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/css/autoFill.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/js/autoFill.bootstrap.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/js/autoFill.bootstrap4.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/js/autoFill.foundation.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/js/autoFill.jqueryui.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/js/autoFill.semanticui.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/AutoFill/js/dataTables.autoFill.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/css/buttons.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/css/buttons.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/css/buttons.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/css/buttons.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/css/buttons.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/css/buttons.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.bootstrap.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.bootstrap4.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.colVis.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.flash.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.foundation.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.html5.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.jqueryui.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.print.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/buttons.semanticui.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/dataTables.buttons.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/jszip.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/pdfmake.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/js/vfs_fonts.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Buttons/swf/flashExport.swf
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/ColReorder/css/colReorder.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/ColReorder/css/colReorder.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/ColReorder/css/colReorder.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/ColReorder/css/colReorder.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/ColReorder/css/colReorder.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/ColReorder/css/colReorder.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/ColReorder/js/dataTables.colReorder.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedColumns/css/fixedColumns.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedColumns/css/fixedColumns.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedColumns/css/fixedColumns.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedColumns/css/fixedColumns.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedColumns/css/fixedColumns.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedColumns/css/fixedColumns.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedColumns/js/dataTables.fixedColumns.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedHeader/css/fixedHeader.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedHeader/css/fixedHeader.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedHeader/css/fixedHeader.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedHeader/css/fixedHeader.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedHeader/css/fixedHeader.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedHeader/css/fixedHeader.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/FixedHeader/js/dataTables.fixedHeader.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/KeyTable/css/keyTable.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/KeyTable/css/keyTable.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/KeyTable/css/keyTable.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/KeyTable/css/keyTable.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/KeyTable/css/keyTable.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/KeyTable/css/keyTable.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/KeyTable/js/dataTables.keyTable.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/css/responsive.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/css/responsive.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/css/responsive.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/css/responsive.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/css/responsive.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/css/responsive.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/js/dataTables.responsive.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/js/responsive.bootstrap.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/js/responsive.bootstrap4.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/js/responsive.foundation.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/js/responsive.jqueryui.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Responsive/js/responsive.semanticui.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowGroup/css/rowGroup.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowGroup/css/rowGroup.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowGroup/css/rowGroup.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowGroup/css/rowGroup.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowGroup/css/rowGroup.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowGroup/css/rowGroup.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowGroup/js/dataTables.rowGroup.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowReorder/css/rowReorder.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowReorder/css/rowReorder.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowReorder/css/rowReorder.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowReorder/css/rowReorder.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowReorder/css/rowReorder.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowReorder/css/rowReorder.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/RowReorder/js/dataTables.rowReorder.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Scroller/css/scroller.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Scroller/css/scroller.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Scroller/css/scroller.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Scroller/css/scroller.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Scroller/css/scroller.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Scroller/css/scroller.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Scroller/js/dataTables.scroller.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Select/css/select.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Select/css/select.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Select/css/select.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Select/css/select.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Select/css/select.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Select/css/select.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-extensions/Select/js/dataTables.select.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-plugins/natural/natural.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-plugins/searchHighlight/dataTables.searchHighlight.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-plugins/searchHighlight/dataTables.searchHighlight.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables-plugins/searchHighlight/jquery.highlight.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/dataTables.bootstrap.extra.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/dataTables.bootstrap.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/dataTables.bootstrap4.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/dataTables.foundation.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/dataTables.jqueryui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/dataTables.material.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/dataTables.semanticui.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/dataTables.uikit.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/jquery.dataTables.extra.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/css/jquery.dataTables.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/js/dataTables.bootstrap.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/js/dataTables.bootstrap4.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/js/dataTables.foundation.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/js/dataTables.jqueryui.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/js/dataTables.material.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/js/dataTables.semanticui.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/js/dataTables.uikit.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/js/jquery.dataTables.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/datatables/license.txt
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/jquery/LICENSE.txt
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/jquery/jquery.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/nouislider/jquery.nouislider.min.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/nouislider/jquery.nouislider.min.js
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/selectize/selectize.bootstrap3.css
docs/articles/gPAM50_tutorial_files/datatables-binding-0.4/lib/selectize/selectize.min.js
docs/articles/gPAM50_tutorial_files/datatables-css-0.0.0/datatables-crosstalk.css
docs/articles/gPAM50_tutorial_files/dt-core-1.10.16/css/jquery.dataTables.extra.css
docs/articles/gPAM50_tutorial_files/dt-core-1.10.16/css/jquery.dataTables.min.css
docs/articles/gPAM50_tutorial_files/dt-core-1.10.16/js/jquery.dataTables.min.js
docs/articles/gPAM50_tutorial_files/figure-html/unnamed-chunk-5-1.png
docs/articles/gPAM50_tutorial_files/figure-html/unnamed-chunk-6-1.png
docs/articles/gPAM50_tutorial_files/figure-html/unnamed-chunk-8-1.png
docs/articles/gPAM50_tutorial_files/figure-html/unnamed-chunk-9-1.png
docs/articles/gPAM50_tutorial_files/htmlwidgets-1.0/htmlwidgets.js
docs/articles/gPAM50_tutorial_files/htmlwidgets-1.2/htmlwidgets.js
docs/articles/gPAM50_tutorial_files/jquery-1.12.4/LICENSE.txt
docs/articles/gPAM50_tutorial_files/jquery-1.12.4/jquery.min.js
docs/articles/index.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/PAM50.html
docs/reference/es.html
docs/reference/extract_PAM50.html
docs/reference/gPAM50.html
docs/reference/getPAM50.html
docs/reference/getPAM50rank.html
docs/reference/index.html
docs/reference/plot4genes.html
docs/reference/plotPAM50.html
docs/reference/plotValidationGenes.html
docs/reference/prepare_df.html
docs/sitemap.xml
man/PAM50.Rd man/es.Rd man/extract_PAM50.Rd man/getPAM50.Rd man/getPAM50rank.Rd man/plotPAM50.Rd man/plotValidationGenes.Rd man/prepare_df.Rd tests/testthat.R vignettes/PAM50_tutorial.Rmd
ccchang0111/PAM50 documentation built on May 31, 2019, 5:40 a.m.