ch.moralsGetAndPlotDirOverlap: A function to get and plot directional overlaps by quantity.

In ccpluncw/ccpl_R_chMorals:

A function to get and plot directional overlaps by quantity.

Description

This function gets and plots directional overlaps by quantity. It simply combines four other functions: ch.moralsGetDirOverlapForAllProbes(); ch.moralsQuantsToGrps(); ch.moralsGetDirOverlapByGrp(); and ch.stripPlotByGrp().

Usage

ch.moralsGetAndPlotDirOverlap(
  data,
  probe1Col,
  probe2Col,
  overlapCol,
  directionCol,
  grpCol = NULL,
  filename = NULL,
  ...
)

Arguments

data	a dataframe containing overlap data for probe combinations.
probe1Col	a string the specifies the column name in "data" that contains the first probe item.
probe2Col	a string the specifies the column name in "data" that contains the second probe item.
overlapCol	a string that specifies the name of the column in "data" that contains the overlap column.
directionCol	a string that specifies the name of the column in "data" that contains the direction column that indications the direction of the overlap.
grpCol	a string the specifies the column name in "data" that contains the grouping variable. DEFAULT = NULL
filename	the filename (pdf) to save the figure. DEFAULT = NULL (file not saved)

Value

a dataframe with the probe in one column, it's average directional overlap in another, its N in another, followed by separate columns containing the average directional overlap and N for each group.

Examples

ch.moralsGetAndPlotDirOverlap (overlapData, "IA1", "IB1", "overlap","direction")

ccpluncw/ccpl_R_chMorals documentation built on Feb. 4, 2024, 3:30 p.m.