bio_dem: Generate demersel flag from Fishbase

Description Usage Arguments Details

Description

This function generates the demersal flag based on Fishbase data. If data are missing from Fishbase, then the flag is assigned 999.

Usage

1
bio_dem(biol_prm = NULL, fun_groups, output_file = "biol.prm")

Arguments

biol_prm

Either user-specified or biol_template

fun_groups

Functional group in data.frame format.

output_file

Name of the output file. Defaults to biol.prm

Details

This function generates the demersal flags sections of the biological parameter file of Atlantis based on Fishbase and inserts them in biological parameter file.


cddesja/R4Atlantis-legacy documentation built on May 13, 2019, 2:21 p.m.