getGraphlistdistance: Pairwise Jensen Shannon divergence between distribution...

Description Usage Arguments Value Author(s) Examples

View source: R/distanceComp.R

Description

Pairwise Jensen Shannon divergence between distribution matrices of a list of graphs

Usage

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getGraphlistdistance(distribMatlist, returnnodeDist = FALSE)

Arguments

distribMatlist

list of probability distribution matrices

returnnodeDist

Return node-wise distances(default=FALSE), if TRUE returns a list containing 2 elements: 1) nodewise distances and 2) graph distance (Gram) matrix

Value

Gram matrix with pairwise distances between graphs

Author(s)

Ichcha Manipur & Mario R Guarracino

Examples

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## Not run: 
data("KidneyGraphs")
binsList <- getBins(KidneyGraphs)
nddList <- lapply(KidneyGraphs, function(x) getNodeDistanceDistr(x, binsList))
nddDistanceMat <- getGraphlistdistance(nddList)
## End(Not run)

cds-group/GraphDistances documentation built on Dec. 14, 2020, 8:26 a.m.