Description Usage Arguments Author(s) Examples
Jensen Shannon divergence between graph toplological distribution matrices
1 | getGraphpairdistance(distrib1, distrib2, returnnodeDist = FALSE)
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distrib1 |
Probability distribution matrix of graph 1 |
distrib2 |
Probability distribution matrix of graph 2 |
returnnodeDist |
Return node-wise distances(default=FALSE), if TRUE returns a list containing 2 elements: 1) nodewise distances and 2) graph distance - between the graph pairs |
Ichcha Manipur & Mario R Guarracino
1 2 3 4 5 6 7 8 9 10 11 12 | ## Not run:
library(igraph)
num_nodes <- 60
g1 <- make_tree(num_nodes, children =2, mode = "out")
E(g1)$weight <- seq_len(ecount(g1))
g2 <- make_tree(num_nodes, children = 3, mode = "out")
E(g2)$weight <- seq_len(ecount(g2))
binList <- getBins(list(g1, g2))
ndd1 <- getNodeDistanceDistr(g1, binList)
ndd2 <- getNodeDistanceDistr(g2, binList)
getGraphpairdistance(ndd1, ndd2)
## End(Not run)
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