celalp/ribofootprintR: Fast data extraction and visualization from .bam files for ribosome footprint profiling experiments

Load, process and analyze ribosome footpring profiling data. This packages allows fast and low memory analysis of sorted and indexed .bam files. The package relies on the Samtools C libraries for initial processing so make sure that they are installed and are in PATH.

Getting started

Package details

AuthorAlper Celik
MaintainerAlper Celik <[email protected]>
LicenseGPL-3
Version0.2.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("celalp/ribofootprintR")
celalp/ribofootprintR documentation built on Jan. 30, 2018, 7:39 p.m.