Description Usage Arguments Examples
View source: R/generate_ontology.R
Comma separated terms are used to define links among components of a nexus character list
1 |
x |
a 'nex' object containing character descriptions |
1 2 3 4 5 6 7 8 9 10 | ## Not run:
x <- read.nex(system.file("extdata", "clarke_2006.nex", package = "phenotools"))
# plot data matrix:
plot(x)
# generate ontology based on comma-separated terms in characters:
ont <- generate_ontology(x)
# plot ontology for humerus characters:
searchtree(ont$tree, pattern="humer")
## End(Not run)
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