Package for Creating and Analyzing Migration Profiles for Single Cell Tracking / Time Lapse Data

angle | Calculate angle of a track object. |

assess | Assess track quality. |

chemotaxis_index | Calculate the mean chemotaxis index of a track object. |

directionality | Calculate the directionality of a track object. |

directional_persistence | Calculate the mean directional_persistence of a track object. |

displace | Add spatial displacement per frame for each track object |

distance | Calculate distance traveled and the integrated distance... |

forward_migration_index | Compute the forward migration index of a tracked object |

lifetime | Calculate lifetime of a track object. |

mean_position | Get mean position |

mean_squared_displacement | Calculate the mean squared displacement of a track object. |

sector_analysis | perform sector analysis and label each track according to its... |

speed | Add spatial displacement per frame for each track object |

track | Compute track statistics |

validate_tracks | Identify valid tracks. Valid tracks are defined as tracks... |

valid_observation_time | calculate valid observation time as sum of the length of all... |

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