summarize_sectors: Summarize sector analysis per experiment

In cells2numbers/neutrominer: Package for Creating and Analyzing Migration Profiles for Single Cell Tracking / Time Lapse Data

Description

Summarize sector analysis per experiment

Usage

summarize_sectors(tracks, strata)

Arguments

tracks	data frame with track objects
strata	column name of track index column

Value

sector_summary

Examples

 data <- tibble::tibble(
   Metadata_timePoint = c(rep(0, 5),rep(1,5)),
   Location_Center_X = c(0, 0, 0, 0, 0, -1,  1,  0,  0, 0),
   Location_Center_Y = c(0, 0, 0, 0, 0,  0,  0,  1, -1, 1),
   TrackObjects_Label = c(1:5,1:4,1),
   Metadata_experiment = c(rep(0,10))
 )

 strata <- c('TrackObjects_Label','Metadata_experiment')
 tracks <- track(data, strata = strata)
 sector <- summarize_sectors(tracks,'Metadata_experiment')

cells2numbers/neutrominer documentation built on May 3, 2019, 9:04 p.m.