Man pages for cgeisenberger/crystalmeth
Streamlined Methylation-Based Classification of Tumors
| ClassificationCase | R6 Class Representing a diagnostic sample |
| ConumeeAnno450k | ConumeeAnno450k. |
| ConumeeAnnoEpic | ConumeeAnnoEpic. |
| crystalmeth | crystalmeth: A streamlined workflow for DNA methylation-based... |
| get_all | Accessor functions for scan_directory() output. |
| get_basename | Extract basename from IDAT filename. |
| get_filename_extension | Extract file name extension |
| get_rf_variables | Extract variable names from randomForest classifier. |
| guess_array_type | Guess type of DNA methylation array. |
| impute_random | Impute missing values. |
| NormalControls450k | NormalControls450k. |
| NormalControlsEpic | NormalControlsEpic. |
| render_report | Render diagnostic report for ClassificationCase object |
| RFpurify_ABSOLUTE | RFpurify_ABSOLUTE. |
| RFpurify_ESTIMATE | RFpurify_ESTIMATE. |
| scan_directory | Scan a directory for IDAT files. |
