Man pages for cgplab/PAMESdata
Precomputed lists of informative CpG sites and islands for PAMES package
| BLCA_auc | Bladder Urothelial Carcinoma |
| BLCA_islands | Bladder Urothelial Carcinoma |
| BLCA_sites | Bladder Urothelial Carcinoma |
| BRCA_auc | Breast invasive carcinoma |
| BRCA_islands | Breast invasive carcinoma |
| BRCA_sites | Breast invasive carcinoma |
| COAD_auc | Colon adenocarcinoma |
| COAD_islands | Colon adenocarcinoma |
| COAD_sites | Colon adenocarcinoma |
| ESCA_auc | Esophageal carcinoma |
| ESCA_islands | Esophageal carcinoma |
| ESCA_sites | Esophageal carcinoma |
| HNSC_auc | Head and Neck squamous cell carcinoma |
| HNSC_islands | Head and Neck squamous cell carcinoma |
| HNSC_sites | Head and Neck squamous cell carcinoma |
| KIRC_auc | Kidney renal clear cell carcinoma |
| KIRC_islands | Kidney renal clear cell carcinoma |
| KIRC_sites | Kidney renal clear cell carcinoma |
| KIRP_auc | Kidney renal papillary cell carcinoma |
| KIRP_islands | Kidney renal papillary cell carcinoma |
| KIRP_sites | Kidney renal papillary cell carcinoma |
| LIHC_auc | Liver hepatocellular carcinoma |
| LIHC_islands | Liver hepatocellular carcinoma |
| LIHC_sites | Liver hepatocellular carcinoma |
| LUAD_auc | Lung adenocarcinoma |
| LUAD_islands | Lung adenocarcinoma |
| LUAD_sites | Lung adenocarcinoma |
| LUSC_auc | Lung squamous cell carcinoma |
| LUSC_islands | Lung squamous cell carcinoma |
| LUSC_sites | Lung squamous cell carcinoma |
| PAAD_auc | Pancreatic adenocarcinoma |
| PAAD_islands | Pancreatic adenocarcinoma |
| PAAD_sites | Pancreatic adenocarcinoma |
| PAMESdata | Precomputed sets of informative CpG sites and CpG islands |
| PRAD_auc | Prostate adenocarcinoma |
| PRAD_islands | Prostate adenocarcinoma |
| PRAD_sites | Prostate adenocarcinoma |
| THCA_auc | Thyroid carcinoma |
| THCA_islands | Thyroid carcinoma |
| THCA_sites | Thyroid carcinoma |
| UCEC_auc | Uterine Corpus Endometrial Carcinoma |
| UCEC_islands | Uterine Corpus Endometrial Carcinoma |
| UCEC_sites | Uterine Corpus Endometrial Carcinoma |
