pubRepFilter: Filter out clonotypes from public repertoires
In charlotterich/immunarch_code: Painless Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires in R
Description
Usage
Arguments
Value
Description
Filter out clonotypes from public repertoires
Usage
1
pubRepFilter(.pr, .meta, .by, .min.samples = 1)
Arguments
.pr
Public repertoires, an output from pubRep.
.meta
Metadata file.
.by
Character vector. Names of groups to group by.
.min.samples
Integer. Filter out clonotypes with number of samples below than this number.
Value
Data frame with filtered clonotypes.
charlotterich/immunarch_code documentation built on Jan. 24, 2020, 12:08 a.m.
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Description Usage Arguments Value
Description
Filter out clonotypes from public repertoires
Usage
1 | pubRepFilter(.pr, .meta, .by, .min.samples = 1)
|
Arguments
.pr |
Public repertoires, an output from pubRep. |
.meta |
Metadata file. |
.by |
Character vector. Names of groups to group by. |
.min.samples |
Integer. Filter out clonotypes with number of samples below than this number. |
Value
Data frame with filtered clonotypes.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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