| bafit | Fitting various Bayesian models |
| baplot | plot result for baFit |
| BATools | BATools: An R package that extends 'Bayesian Alphabet' for... |
| createCV | Quickly create cross-validation folds |
| man_plot_prob | Create Manhattan plot for posterior probability based models |
| man_plot_pvalue | Create Manhattan plot for pvalue based models |
| Pig | A dataset contains an example of MSUPRP F2 Pig data |
| print.ba | A print method for ba objects |
| set.init | Set initial values for hyperparameters |
| set.options | create 'options' object |
| set.win | create fix size window |
| std_geno | Re-center genotype matrix |
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