print.ba: A print method for ba objects

In chenchunyu88/BATools: BATools: An R package that extends 'Bayesian Alphabet' for Whole Genome Prediction and Genome-wide association study

Description

A print method for ba objects

Usage

## S3 method for class 'ba'
print(x, ...)

Arguments

x	an object of the class ba generated by bafit

Value

Null. This function only prints to the screen.

Examples

## Not run: 
 rm(list=ls())
 library(BATools)
 data("Pig")
 #Standardize genotype matrix
 #or set your own starting values using 
 #init=list(df=5,scale=0.01,pi=1) 
 run_para=list(niter=2000,burnIn=1000,skip=10)
 print_mcmc=list(piter=500)
 update_para=list(df=FALSE,scale=TRUE,pi=F)
 op<-create.options(model="SSVS",method="MCMC",seed=1,priors=NULL,init=init,
                  update_para=update_para,run_para=run_para,save.at="SSVS",print_mcmc=print_mcmc)
 SSVS<-baFit(driploss~sex,data=PigPheno,geno=geno ,genoid = ~id,options = op,map=PigMap,GWA="Win")
 SSVS

## End(Not run)

chenchunyu88/BATools documentation built on May 19, 2019, 8:21 a.m.