chenlab-sj/nbid: Differential expression analysis using negative binomial with independent dispersions (NBID)
This package provides functions for modeling UMI based single cell RNA-Seq (scRNA-seq) data. It includes functions for model fitting and goodness of fit tests with different distributions. It also provides a function for differential expression analysis between groups using negative binomial with independent dispersion parameters for each group.
Getting started
Browse package contents
Package details |
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| Author | Wenan Chen, Yan Li |
| Maintainer | The package maintainer <wenan.chen@stjude.org> |
| License | GPLv3 |
| Version | 0.1.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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