volcano: volcano

In chiragjp/xwas: X-Wide Association Analyses

Description

Takes a list of linear regressions and displays a volcano plot.

Usage

volcano(data, qthreshold = 0.05, xlab = "Effect",
  ylab = expression(-log[10] * "(p-value)"), pch = 20, ...)

Arguments

data	is the vector containing a list of p-values to display in a manhattan plot.
qthreshold	is the cutoff of significance (the q-value).
xlab	is a default x-axis label passed on to the plot function.
ylab	is a default y-axis label passed on to the plot function.
pch	is default to 20 which is a small bullet passed onto the plot function.
...	are additional arguments passed onto the plot function.

Value

none

Examples

## Not run: 
volcano()
volcano(data)

## End(Not run)

chiragjp/xwas documentation built on May 13, 2019, 5:27 p.m.