API for chr1swallace/annotSnpStats
Annotated SnpMatrix objects

Global functions
[,aSnpMatrix,ANY,ANY,missing-method	Man page
[,aSnpMatrix,ANY,missing,missing-method	Man page
[,aSnpMatrix,missing,ANY,missing-method	Man page
[,aXSnpMatrix,ANY,ANY,missing-method	Man page
[,aXSnpMatrix,ANY,missing,missing-method	Man page
[,aXSnpMatrix,missing,ANY,missing-method	Man page
aSnpMatrix	Man page
aSnpMatrix-class	Man page
aXSnpMatrix-class	Man page
add.samples	Man page
add.samples,aSnpMatrix,aSnpMatrix-method	Man page
add.snps	Man page
add.snps,aSnpMatrix,aSnpMatrix-method	Man page
align.alleles	Man page Source code
alleles	Man page
alleles.update	Source code
alleles<-	Man page
annot.plink	Man page Source code
annot.read.plink	Man page Source code
annotSnpStats	Man page
annotSnpStats-package	Man page
asw	Source code
cbind2,aSnpMatrix,aSnpMatrix-method	Man page
cbind2,aXSnpMatrix,aXSnpMatrix-method	Man page
cdups	Source code
cdupsw	Source code
colnames<-,aSnpMatrix-method	Man page
colnames<-,aXSnpMatrix-method	Man page
count.switches	Source code
dimnames<-,aSnpMatrix,ANY-method	Man page
dimnames<-,aXSnpMatrix,ANY-method	Man page
dups	Man page Source code
example.data	Man page Source code
fix.factors	Source code
g.class	Man page Source code
g.complement	Man page Source code
g.count	Man page Source code
g.rev	Man page Source code
impute.missing	Man page Source code
ld	Man page Source code
phenotype	Man page
phenotype<-	Man page
phenotype<-,aSnpMatrix	Man page
rbind2,aSnpMatrix,aSnpMatrix-method	Man page
rbind2,aXSnpMatrix,aXSnpMatrix-method	Man page
rownames<-,aSnpMatrix-method	Man page
rownames<-,aXSnpMatrix-method	Man page
sample.id	Source code
sample.match	Man page Source code
samples	Man page
samples<-	Man page
show,aSnpMatrix-method	Man page
sm	Man page Source code
snp.id	Source code
snp.match	Man page Source code
snp.qc	Man page Source code
snps	Man page
snps<-	Man page
switch.alleles,aSnpMatrix,ANY-method	Man page
switch.alleles,aXSnpMatrix,ANY-method	Man page