accessors | Accessors |
align.alleles | align.alleles |
annot.plink | annot.plink |
annot.read.plink | annot.read.plink |
annotSnpStats-package | annotSnpStats |
aSnpMatrix-class | Annotated SnpMatrix class |
binding | Binding |
dups | Find duplicate samples |
example.data | example.data |
g.class | g.class |
g.complement | Complement genotypes |
g.count | count specific genotypes |
g.rev | Reverse alleles in a genotype |
impute.missing | Fill in missing values in aSnpMatrix object |
ld | Wrapper to allow snpStats::ld to be called with aSnpMatrix... |
methods | Methods for aSnpMatrix and aXSnpMatrix objects |
sample.match | snp.match |
sm | Extract snpMatrix object from an object of class aSnpMatrix |
snp.match | snp.match |
snp.qc | snp.qc |
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