Files in chris-mcginnis-ucsf/MULTI-seq
deMULTIplex is a software suite for MULTI-seq sample barcode FASTQ pre-processing and cell barcode classification.
DESCRIPTION
Figures/MULTIseq.overview.png
Figures/MULTIseq_Alignment.png
Figures/MULTIseq_Alignment_2.png
Figures/MULTIseq_ClassificationWorkflow.png
Figures/MULTIseq_NegativeCellReclassification.png
Figures/Tutorial_BarRef_CellIDs.png
Figures/Tutorial_align.out.png
Figures/Tutorial_final.classification.results.png
Figures/Tutorial_good.qsweep.png
Figures/Tutorial_good.vs.bad.bc.tsnes.png
Figures/Tutorial_match.rate.cs.png
Figures/Tutorial_preprocess.out.png
Figures/Tutorial_rescue.out.png
NAMESPACE
R/MULTIseq.Align.Suite.R
R/MULTIseq.Classification.Suite.R
README.md
barTable_pbmc.Robj
deMULTIplex.Rproj
man/MULTIseq.align.Rd
man/MULTIseq.preProcess.Rd
man/MULTIseq.preProcess_allCells.Rd
man/alignRate.Rd
man/barTSNE.Rd
man/bucket_cellIDs.Rd
man/bucket_readTable.Rd
man/classifyCells.Rd
man/findQ.Rd
man/findReclassCells.Rd
man/findThresh.Rd
man/localMaxima.Rd
man/rescueCells.Rd
