bucket_readTable: bucket_readTable
In chris-mcginnis-ucsf/MULTI-seq: deMULTIplex is a software suite for MULTI-seq sample barcode FASTQ pre-processing and cell barcode classification.
View source: R/MULTIseq.Align.Suite.R
bucket_readTable R Documentation
bucket_readTable
Description
'bucket_readTable' is an internal function for 'MULTIseq.align' which splits read tables into 10,000-cellID buckets. Requires input from 'bucket_cellIDs'
Usage
bucket_readTable(readTable, cellIDs_bucketed)
Arguments
readTable
Parsed read table, as provided by 'MULTIseq.preProcess'
cellIDs_bucketed
Bucketed list of cellIDs, as provided by 'bucket_cellIDs'
Value
A list of readTables containing all reads associated with sets of 10,000-cells.
Author(s)
Chris McGinnis
Examples
readTable.list <- bucket_readTable(readTable, cellIDs_bucketed)
chris-mcginnis-ucsf/MULTI-seq documentation built on Nov. 22, 2023, 8:24 p.m.
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View source: R/MULTIseq.Align.Suite.R
| bucket_readTable | R Documentation |
bucket_readTable
Description
'bucket_readTable' is an internal function for 'MULTIseq.align' which splits read tables into 10,000-cellID buckets. Requires input from 'bucket_cellIDs'
Usage
bucket_readTable(readTable, cellIDs_bucketed) Arguments
readTable |
Parsed read table, as provided by 'MULTIseq.preProcess' |
cellIDs_bucketed |
Bucketed list of cellIDs, as provided by 'bucket_cellIDs' |
Value
A list of readTables containing all reads associated with sets of 10,000-cells.
Author(s)
Chris McGinnis
Examples
readTable.list <- bucket_readTable(readTable, cellIDs_bucketed) R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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