README.md

In christianparobek/skeleSim: Genetic Simulation Engine

skeleSim

Description

skeleSim is a tool to guide users in choosing appropriate simulations, setting parameters, calculating summary genetic statistics, and organizing data output, all within the R environment. skeleSim is designed to be an extensible environment that can 'wrap' around any simulation software to increase its accessibility and use.

Installation

To install the latest version from GitHub:

# make sure you have Rtools installed
if (!require('devtools')) install.packages('devtools')
# install from GitHub
devtools::install_github('christianparobek/skeleSim', build_vignettes = TRUE)

Execution

To run the shiny app:

# Load the skeleSim package
library(skeleSim)

# Run the app
skeleSimGUI()

Contact

• submit suggestions and bug-reports: https://github.com/christianparobek/skeleSim/issues
• send a pull request: https://github.com/christianparobek/skeleSim/

version 0.9.6

• fixed bug in haplotype summary producing error:

Error in summary(loc.g)$strata.smry : 
  $ operator is invalid for atomic vectors

version 0.9.5

• First CRAN release.

christianparobek/skeleSim documentation built on Feb. 29, 2020, 6:58 p.m.