library(ggplot2)
# scale_color_cr() --------------------------------------------------------
test_that("color scale is applied to graph", {
df <- data.frame(x = 1:5, y = 1:5, z = c("IL6", "IL8", "IL6R", "IL6", "IL8R"))
p <- ggplot(df, aes(x, y, color = z)) +
geom_point()
expect_snapshot_plot("default colors, no matching",
p + scale_color_cr("default") + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("select colors by color name",
p + scale_color_cr(
"receptors",
ncol = NULL, species = NULL,
colors = c("orange", "green", "darkblue", "yellow")
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("select colors by species name",
p + scale_color_cr(
"receptors",
ncol = NULL, colors = NULL,
species = unique(df$z)
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("select colors by number",
p + scale_color_cr(
"receptors",
colors = NULL, species = NULL,
ncol = c(2,5)
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("can rename color legend with name argument",
p + scale_color_cr(
"receptors",
colors = NULL, species = NULL, ncol = NULL,
name = "Species"
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("alpha value modifies color",
p + scale_color_cr(
"receptors",
colors = NULL, species = NULL,
ncol = c(2,5),
alpha = 0.5
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("alpha also works in geom_point",
ggplot(df, aes(x, y, color = z)) +
geom_point(alpha = 0.5) +
scale_color_cr(
"receptors",
species = NULL, colors = NULL,
ncol = c(2,5)
) + theme_cr(cairo = TRUE, font = "")
)
})
# scale_fill_cr() ---------------------------------------------------------
test_that("fill scale is applied to graph", {
df <- data.frame(
x = factor(c("IL6R", "IL8R", "IL6R-Ab", "IL8R-Ab", "IL6R-Ab-IL8R"),
levels = c("IL6R", "IL8R", "IL6R-Ab", "IL8R-Ab", "IL6R-Ab-IL8R")),
y = c(0.45, 0.78, 0.61, 0.31, 0.72))
p <- ggplot(df, aes(x, y, fill = x)) +
geom_col()
expect_snapshot_plot("default fill, no matching",
p + scale_fill_cr("default") + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("select fill by color name",
p + scale_fill_cr(
"receptors",
species = NULL, ncol = NULL,
colors = c("orange", "green", "darkblue", "yellow", "lightblue")
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("select fill by species name",
p + scale_fill_cr(
"receptors",
ncol = NULL, colors = NULL,
species = unique(df$x)
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("select fill by number",
p + scale_fill_cr(
"receptors",
colors = NULL, species = NULL,
ncol = c(2,6)
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("can rename fill legend with name argument",
p + scale_fill_cr(
"receptors",
colors = NULL, species = NULL, ncol = NULL,
name = "Species"
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("alpha value modifies fill",
p + scale_fill_cr(
"receptors",
colors = NULL, species = NULL,
ncol = c(2,6),
alpha = 0.5
) + theme_cr(cairo = TRUE, font = "")
)
expect_snapshot_plot("alpha also works in geom_col",
ggplot(df, aes(x, y, fill = x)) +
geom_col(alpha = 0.5) +
scale_fill_cr(
"receptors",
colors = NULL, species = NULL,
ncol = c(2,6)
) + theme_cr(cairo = TRUE, font = "")
)
})
# scale_cr() and theme_cr() -----------------------------------------------
test_that("scale and theme functions can be added together", {
df <- data.frame(x = 1:5, y = 1:5, z = c("IL6", "IL8", "IL6R", "IL6", "IL8R"))
p <- ggplot(df, aes(x, y, color = z)) +
geom_point()
expect_snapshot_plot("theme and color scale",
p + scale_color_cr("receptors") + theme_cr(cairo = TRUE, font = "")
)
df <- data.frame(
x = factor(c("IL6R", "IL8R", "IL6R-Ab", "IL8R-Ab", "IL6R-Ab-IL8R"),
levels = c("IL6R", "IL8R", "IL6R-Ab", "IL8R-Ab", "IL6R-Ab-IL8R")),
y = c(0.45, 0.78, 0.61, 0.31, 0.72))
p <- ggplot(df, aes(x, y, fill = x)) +
geom_col()
expect_snapshot_plot("theme and fill scale",
p + scale_fill_cr("receptors") + theme_cr(cairo = TRUE, font = "")
)
})
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