Files in churchill-lab/qtl2api

QTL2 API Library

LICENSE.md R/calc-correlation-plot.R R/calc-correlation.R R/calc-founder-coefficients.R R/calc-lod-peaks-for-annot.R R/calc-lod-scores-by-covar.R R/calc-lod-scores.R R/calc-mediation.R R/calc-rankings.R R/calc-residual-matrix.R R/calc-snp-assoc-mapping.R R/get-analysis.R R/get-covar-matrix.R R/get-data.R R/get-dataset-by-id.R R/get-dataset-info.R R/get-dataset-stats.R R/get-expression.R R/get-lod-peaks-by-covar.R R/get-lod-peaks.R R/get-markers.R R/get-random-id.R R/get-sample-id-field.R R/id-exists.R R/qtl2api-package.R R/qtl2api-utils.R R/synchronize-data.R R/synchronize-dataset.R R/synchronize-samples.R README.md docs/DataElement.md docs/DataElement.pdf man/calc_correlation.Rd man/calc_correlation_plot.Rd man/calc_founder_coefficients.Rd man/calc_lod_peaks_for_annot.Rd man/calc_lod_scores.Rd man/calc_lod_scores_by_covar.Rd man/calc_mediation.Rd man/calc_rankings.Rd man/calc_residual_matrix.Rd man/calc_snp_assoc_mapping.Rd man/get_analysis.Rd man/get_covar_matrix.Rd man/get_data.Rd man/get_dataset_by_id.Rd man/get_dataset_info.Rd man/get_dataset_stats.Rd man/get_expression.Rd man/get_lod_peaks.Rd man/get_lod_peaks_by_covar.Rd man/get_markers.Rd man/get_random_id.Rd man/get_sample_id_field.Rd man/id_exists.Rd man/invalid.Rd man/is_phenotype.Rd man/mediation.scan.Rd man/nvl.Rd man/nvl_int.Rd man/reexports.Rd man/synchronize_data.Rd man/synchronize_dataset.Rd man/synchronize_samples.Rd man/valid.Rd man/version.Rd renv/activate.R scripts/compare.R scripts/validate-annotations.R scripts/validate-covar-info.R scripts/validate-data.R scripts/validate-dataset-by-api.R scripts/validate-dataset.R scripts/validate-environment.R scripts/validate-lod-peaks.R scripts/validate-samples.R scripts/validate.R