Files in clsong/topodetective
Infer topology of species interactions from time series of species abundance
.DS_Store
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
Icon
InferInteractions.Rproj
NAMESPACE
R/.DS_Store
R/InferInteractions-package.R
R/equations.R
R/fit_trajectory.R
R/package_dependency.R
R/plot.R
R/solve_ODEs.R
R/toolbox_maynard.R
R/utils-pipe.R
README.Rmd
README.md
README_cache/gfm/__packages
README_cache/gfm/unnamed-chunk-3_14bc72d0326f24f73a1cd4a91ba69b78.RData
README_cache/gfm/unnamed-chunk-3_14bc72d0326f24f73a1cd4a91ba69b78.rdb
README_cache/gfm/unnamed-chunk-3_14bc72d0326f24f73a1cd4a91ba69b78.rdx
main.R
man/.DS_Store
man/choose_regression_model.Rd
man/differentiate_ts.Rd
man/evaluate_fit.Rd
man/figures/README-example-1.png
man/figures/README-unnamed-chunk-2-1.png
man/figures/README-unnamed-chunk-4-1.png
man/figures/README-unnamed-chunk-5-1.png
man/figures/README-unnamed-chunk-5-2.png
man/fit_interaction_parameters.Rd
man/generate_time_series.Rd
man/generate_time_series_LV.Rd
man/generate_top_model_candidates.Rd
man/get_LV_dynamics.Rd
man/get_classic_dynamics.Rd
man/get_topology_label.Rd
man/pipe.Rd
man/plot_interaction_topology.Rd
man/plot_time_series.Rd
man/plot_true_vs_simu.Rd
man/simualte_fitted_dynamics.Rd
man/topodetective-package.Rd
