Files in cmatKhan/bartNP
Execute BART on TF perturbation data
.Rbuildignore
.Rprofile
.github/.gitignore
.github/workflows/check-standard.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/AllClasses.R
R/AllGenerics.R
R/bart.R
R/bartNP-package.R
R/methods.R
R/utils-pipe.R
README.md
Singularity
_pkgdown.yml
bartNP.Rproj
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/articles/holstege_deleteome_nps.html
docs/articles/index.html
docs/authors.html
docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js
docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.1.0/bootstrap.min.css
docs/deps/data-deps.txt
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/index.html
docs/link.svg
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/NetProphetDataSet.html
docs/reference/bartForOneGene.html
docs/reference/bartNP-package.html
docs/reference/exprMat.html
docs/reference/index.html
docs/reference/nonRegGenes.html
docs/reference/pipe.html
docs/reference/regMatrix.html
docs/reference/regPredictors.html
docs/reference/sub-NetProphetDataSet-ANY-ANY-ANY-method.html
docs/search.json
docs/sitemap.xml
man/NetProphetDataSet.Rd
man/bartForOneGene.Rd
man/bartNP-package.Rd
man/exprMat.Rd
man/nonRegGenes.Rd
man/pipe.Rd
man/regMatrix.Rd
man/regPredictors.Rd
man/sub-NetProphetDataSet-ANY-ANY-ANY-method.Rd
renv.lock
renv/.gitignore
renv/activate.R
renv/profiles/dev/renv.lock
renv/profiles/production/renv.lock
renv/profiles/production/renv/settings.dcf
renv/settings.dcf
tests/testthat.R
tests/testthat/test-bart.R
vignettes/.gitignore
vignettes/holstege_deleteome_nps.Rmd
vignettes/references.bib
