sub-NetProphetDataSet-ANY-ANY-ANY-method: subsetting the NetProphetDataSet
In cmatKhan/bartNP: Execute BART on TF perturbation data
Description
Usage
Arguments
Value
Description
subsetting the NetProphetDataSet
Usage
1
2
Arguments
x
a NetProphetDataSet object
i
column index or incicies (a numeric or boolean vector)
j
column filter – an index, name, boolean or vector of them
drop
default TRUE. This may not do anything – need to check if
it is part of the Extending SummarizedExperiment documentation, or a
feature I added, then removed and forgot to remove the argument.
Value
a NetProphetDataSet. If the subsetting is on the genes, the regulation
matrix will also be gene filtered in the same way as the counts. Column
filtering does not currently affect the regulation matrix
cmatKhan/bartNP documentation built on Dec. 19, 2021, 5:16 p.m.
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Description Usage Arguments Value
Description
subsetting the NetProphetDataSet
Usage
1 2 |
Arguments
x |
a NetProphetDataSet object |
i |
column index or incicies (a numeric or boolean vector) |
j |
column filter – an index, name, boolean or vector of them |
drop |
default TRUE. This may not do anything – need to check if it is part of the Extending SummarizedExperiment documentation, or a feature I added, then removed and forgot to remove the argument. |
Value
a NetProphetDataSet. If the subsetting is on the genes, the regulation matrix will also be gene filtered in the same way as the counts. Column filtering does not currently affect the regulation matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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