highly_expressed_gene_virtual_table: create virtual table of only highly expressed gene regions in...
In cmatKhan/mislabels: Biostrings Algorithms Final Project

highly_expressed_gene_virtual_table

R Documentation

create virtual table of only highly expressed gene regions in the db

create virtual table of only highly expressed gene regions in the db

highly_expressed_gene_virtual_table(
  highly_expressed_gene_ranges,
  db_path,
  sample_viewname,
  tablename = "sample_genotype"
)

`highly_expressed_gene_ranges`	a GRangeList of regions over which to create a virtual table (a subset of the entire table)
`db_path`	a path, eg /path/to/sample_geno_db.sqlite, to where you'd like to create the sqlite database file
`sample_viewname`	name of the sample view table in the db
`tablename`	name of the table from which to make the sample view