.Rbuildignore
.gitattributes
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/.gitignore
R/PD_from_rasters.R
R/SE.R
R/aooArea.R
R/cRRrmm.R
R/calc_PE.R
R/complementarity.R
R/envChange.R
R/futureOverlap.R
R/mcp.R
R/mcpSDM.R
R/ratioOverlap.R
R/startup.r
README.md
changeRangeR.Rproj
docs/BiodivMetrics.html
docs/changeRangeRwebsite.html
docs/index.Rmd
docs/index.html
docs/singleSpeciesMetrics.html
inst/extdata/DemoData/MODIS/2005_olinguito_Modis_coarse.tif
inst/extdata/DemoData/MODIS/2006_olinguito_Modis_coarse.tif
inst/extdata/DemoData/MODIS/2008_olinguito_Modis_coarse.tif
inst/extdata/DemoData/MODIS/2009_olinguito_Modis_coarse.tif
inst/extdata/DemoData/SDM/Climatically_suitable_projected_coarse.tif
inst/extdata/DemoData/SDM/Forest_suitable_projected_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Alouatta_palliata_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Alouatta_seniculus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Aotus_brumbacki_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Aotus_griseimembra_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Aotus_lemurinus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Aotus_nancymaae_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Aotus_zonalis_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Ateles_belzebuth_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Ateles_fusciceps_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Ateles_hybridus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cacajao_melanocephalus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Callimico_goeldii_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cebuella_pygmaea_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cebus_albifrons_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cebus_all_albifrons_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cebus_capucinus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cebus_leucocephalus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cebus_malitiosus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cebus_versicolor_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cheracebus_lugens_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Cheracebus_medemi_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Lagothrix_lagothricha_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Leontocebus_fuscus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Leontocebus_nigricollis_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Pithecia_hirsuta_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Pithecia_milleri_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Plecturocebus_caquetensis_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Plecturocebus_discolor_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Plecturocebus_ornatus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Saguinus_geoffroyi_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Saguinus_inustus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Saguinus_leucopus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Saguinus_oedipus_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Saimiri_cassiquiarensis_veg_coarse.tif
inst/extdata/DemoData/SDM/colPrimates_binary/Sapajus_apella_veg_coarse.tif
inst/extdata/DemoData/SDM/franLang/climateOnlyFrancoisi.BCC.2040s.ssp2.tif
inst/extdata/DemoData/SDM/franLang/climateOnlyFrancoisi.BCC.2060s.ssp2.tif
inst/extdata/DemoData/SDM/olinguitoSDM_coarse.tif
inst/extdata/DemoData/locs/10KM_thin_2017.csv
inst/extdata/DemoData/locs/All_localities_30n.csv
inst/extdata/DemoData/phyloTree/output.nex
inst/extdata/DemoData/shapefiles/WDPA_COL_olinguito_simp.rds
inst/extdata/DemoData/shapefiles/vn/VN_NRs_simp.rds
man/Species-Endemism.Rd
man/aooArea.Rd
man/buildRMM.Rd
man/calc_PE.Rd
man/complementarity.Rd
man/envChange.Rd
man/futureOverlap.Rd
man/mcp.Rd
man/mcpSDM.Rd
man/ratioOverlap.Rd
tests/testthat.R
tests/testthat/test_SE.R
tests/testthat/test_aooArea.R
tests/testthat/test_cRRrmm.R
tests/testthat/test_calcPE.R
tests/testthat/test_complementarity.R
tests/testthat/test_envChange.R
tests/testthat/test_futureOverlap.R
tests/testthat/test_mcp.R
tests/testthat/test_mcpSDM.R
tests/testthat/test_ratioOverlap.R
vignettes/BiodivMetrics.Rmd
vignettes/BiodivMetrics_files/figure-latex/unnamed-chunk-11-1.pdf
vignettes/BiodivMetrics_files/figure-latex/unnamed-chunk-3-1.pdf
vignettes/singleSpeciesMetrics.R
vignettes/singleSpeciesMetrics.Rmd