Reff_Wij_I_P: Estimate effective reproduction number as function of mean...

In cmhoove14/DDNTD: Density Dependence in Neglected Tropical Diseases

Description

Estimates the effective reproduction number, $R_eff$ as a function of model parameters, mean worm burden in each age and treatment population, infected snail prevalence, and different options for density dependence parameters

Usage

Reff_Wij_I_P(pars, W_TC, W_UC, W_TA, W_UA, I_P, PDD, DDF, DDI)

Arguments

pars	parameter set
W_TC	mean worm burden in treated SAC group
W_UC	mean worm burden in untreated SAC group
W_TA	mean worm burden in treated adult group
W_UA	mean worm burden in untreated adult group
PDD	positive density dependence function
DDF	density dependent fecundity function
DDI	density dependent acquired immunity function

Value

estimate of the effective reproduction number and the population average mean worm burden

cmhoove14/DDNTD documentation built on Nov. 23, 2019, 7:04 p.m.