samp.reduc: samp.reduc

In cnfoley/hyprcoloc: Hypothesis Prioritisation in multi-trait Colocalization (HyPrColoc)

Description

samp.reduc

Usage

samp.reduc(
  Z,
  W,
  ld.matrix,
  trait.cor,
  sample.overlap,
  trts,
  window.size = dim(Z)[1],
  sentinel = 0,
  Zsq,
  Wsq
)

Arguments

Z	matrix of Z-scores
W	ratio matrix of prior standard deviation and observed standard errors
ld.matrix	LD matrix
trait.cor	correlation matrix between traits
sample.overlap	matrix of sample overlap between traits
trts	vector of traits
window.size	size of window for 2CV testing
sentinel	sentinel variant
Zsq	matrix of Z-scores squared
Wsq	matrix of W squared

cnfoley/hyprcoloc documentation built on Feb. 15, 2021, 7:55 p.m.