read_gff: Reading and Writing GFF Files
In colbyford/cytosieve: In silico cytometric filtering of bulk sequencing data using transcriptional profiles.
Description
Usage
Arguments
Examples
Description
Read and write General Feature Format (a.k. gene-finding format, generic feature format, GFF) is a file format for describing genes and other genetic features.
Usage
1
Arguments
path
String. Path to the input/output .gff file.
na_strings
Vector of strings.
Which strings in the GFF file are missing values and should be converted to NAs. (Default: 'c(".", "?")')
append
Logical. Should the process overwrite the existing file? (Default: FALSE)
Examples
1
2
gff <- read_gff("folder/myfile.gff")
write_gff(gff_filtered, path = "folder/myfile_filtered.gff")
colbyford/cytosieve documentation built on April 24, 2021, 8:24 p.m.
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Description Usage Arguments Examples
Description
Read and write General Feature Format (a.k. gene-finding format, generic feature format, GFF) is a file format for describing genes and other genetic features.
Usage
1 |
Arguments
path |
String. Path to the input/output .gff file. |
na_strings |
Vector of strings. Which strings in the GFF file are missing values and should be converted to NAs. (Default: 'c(".", "?")') |
append |
Logical. Should the process overwrite the existing file? (Default: FALSE) |
Examples
1 2 | gff <- read_gff("folder/myfile.gff")
write_gff(gff_filtered, path = "folder/myfile_filtered.gff")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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