compare_connections | R Documentation |
Compare two sets of connections and return a vector of logicals for whether connections in one are present in the other.
compare_connections(conns1, conns2, maxgap = 0)
conns1 |
A data frame of Cicero connections, like those output from
|
conns2 |
A data frame of connections to be searched for overlap. The first two columns must be coordinates of genomic sites that are connected. |
maxgap |
The number of base pairs between peaks allowed to be called
overlapping. See |
A vector of logicals of whether the Cicero pair is present in the alternate dataset.
## Not run: cons$in_dataset <- compare_connections(conns, alt_data) ## End(Not run)
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