metabolomicsWorkbenchR: metabolomicsWorkbenchR

In computational-metabolomics/metabolomicsWorkbenchR: Metabolomics Workbench in R

metabolomicsWorkbenchR

Description

This package provides an interface to the Metabolomics Workbench API. It can be used to query the Metabolomics Workbench for study, compound, protein, gene information and more. All endpoints of the API are available via a simple do_query method. A number of convenience functions are included to import study data as SummarizedExperiment objects to facilitate use within R and the Bioconductor community.

See Also

• do_query for a simple example.

• browseVignettes("metabolomicsWorkbenchR") for more info.

• Visit https://www.metabolomicsworkbench.org/tools/mw_rest.php for details of the API.

computational-metabolomics/metabolomicsWorkbenchR documentation built on Oct. 3, 2023, 7 a.m.