Description Usage Arguments Value
Wrapper function to transform data for statistical analysis
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Data |
Data frame. |
classes |
Vector of class labels. |
blank |
Label used for blank samples, if set to NULL no samples will be removed. |
PQN |
Can be set to T or F, to perform PQN normalisation. |
mv_impute |
T or F, indicates if missing value imputation has to be carried. |
glogScaling |
T or F, applie glog transformation to the given data. |
qc_label |
Label used for QC samples. If set to NULL, assumes that no QC samples are present in data set. |
ignorelabel |
Label for samples which should be excluded from processed data. |
checkNA |
removes rows or columns containing all NA's, also will chek if only all QC or analytical samples contain missing values. |
store_lambda |
If value of glog optimised lambda parameter needs to be returned. |
List of processed data table and RSD
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