const-ae/transformGamPoi: Variance Stabilizing Transformation for Gamma-Poisson Models

Variance-stabilizing transformations help with the analysis of heteroskedastic data (i.e., data where the variance is not constant, like count data). This package provide two types of variance stabilizing transformations: (1) methods based on the delta method (e.g., 'acosh', 'log(x+1)'), (2) model residual based (Pearson and randomized quantile residuals).

Getting started

Package details

Bioconductor views Normalization Preprocessing Regression SingleCell
Maintainer
LicenseGPL-3
Version1.3.1
URL https://github.com/const-ae/transformGamPoi
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("const-ae/transformGamPoi")
const-ae/transformGamPoi documentation built on Aug. 8, 2022, 2:19 a.m.