geom_origin: Marker or unit circle at the origin

In corybrunson/ordr: A Tidyverse Extension for Ordinations and Biplots

Marker or unit circle at the origin

Description

geom_origin() renders a symbol, either a set of crosshairs or a circle, at the origin. geom_unit_circle() renders the unit circle, centered at the origin with radius 1.

Usage

geom_origin(
  mapping = NULL,
  data = NULL,
  marker = "crosshairs",
  radius = unit(0.04, "snpc"),
  ...,
  na.rm = FALSE,
  show.legend = NA,
  inherit.aes = FALSE
)

geom_unit_circle(
  mapping = NULL,
  data = NULL,
  segments = 60,
  scale.factor = 1,
  ...,
  na.rm = FALSE,
  show.legend = NA,
  inherit.aes = FALSE
)

Arguments

mapping	Set of aesthetic mappings created by aes(). If specified and inherit.aes = TRUE (the default), it is combined with the default mapping at the top level of the plot. You must supply mapping if there is no plot mapping.
data	The data to be displayed in this layer. There are three options: If NULL, the default, the data is inherited from the plot data as specified in the call to ggplot(). A data.frame, or other object, will override the plot data. All objects will be fortified to produce a data frame. See fortify() for which variables will be created. A function will be called with a single argument, the plot data. The return value must be a data.frame, and will be used as the layer data. A function can be created from a formula (e.g. ~ head(.x, 10)).
marker	The symbol to be drawn at the origin; matched to "crosshairs" or "circle".
radius	A grid::unit() object that sets the radius of the crosshairs or of the circle.
...	Additional arguments passed to ggplot2::layer().
na.rm	Passed to ggplot2::layer().
show.legend	logical. Should this layer be included in the legends? NA, the default, includes if any aesthetics are mapped. FALSE never includes, and TRUE always includes. It can also be a named logical vector to finely select the aesthetics to display.
inherit.aes	If FALSE, overrides the default aesthetics, rather than combining with them. This is most useful for helper functions that define both data and aesthetics and shouldn't inherit behaviour from the default plot specification, e.g. borders().
segments	The number of segments to be used in drawing the circle.
scale.factor	The circle radius; should remain at its default value 1 or passed the same value as ggbiplot(). (This is an imperfect fix that may be changed in a future version.)

Value

A ggproto layer.

Biplot layers

ggbiplot() uses ggplot2::fortify() internally to produce a single data frame with a .matrix column distinguishing the subjects ("rows") and variables ("cols"). The stat layers stat_rows() and stat_cols() simply filter the data frame to one of these two.

The geom layers ⁠geom_rows_*()⁠ and ⁠geom_cols_*()⁠ call the corresponding stat in order to render plot elements for the corresponding factor matrix. ⁠geom_dims_*()⁠ selects a default matrix based on common practice, e.g. points for rows and arrows for columns.

Aesthetics

geom_origin() accepts no aesthetics. geom_unit_circle() understands the following aesthetics (none required):

• linetype

• linewidth

• colour

• alpha

See Also

Other geom layers: geom_axis(), geom_bagplot(), geom_interpolation(), geom_isoline(), geom_lineranges(), geom_rule(), geom_text_radiate(), geom_vector()

Examples

ggplot(seals, aes(delta_long, delta_lat)) +
  theme_void() +
  geom_origin() +
  geom_point(alpha = .25)
# center each group separately
iris |> 
  split(~ Species) |> 
  lapply(subset, select = -c(Species)) |> 
  lapply(scale, center = TRUE, scale = FALSE) |> 
  lapply(as.data.frame) |> 
  unsplit(iris$Species) |> 
  transform(Species = iris$Species) ->
  iris_ctr
ggplot(iris_ctr, aes(Petal.Width, Petal.Length)) +
  coord_equal() +
  facet_wrap(vars(Species)) +
  geom_unit_circle() +
  geom_point()
# scale group mean differences uniformly
iris_ctr |> 
  subset(select = -c(Species)) |> 
  scale(center = FALSE, scale = TRUE) |> 
  transform(Species = iris$Species) |> 
  ggplot(aes(Petal.Width, Petal.Length)) +
  coord_equal() +
  facet_wrap(vars(Species)) +
  geom_unit_circle() +
  geom_point()

corybrunson/ordr documentation built on Feb. 24, 2025, 6:34 a.m.