MsBackendRawFileReader-class: RawFileReader-based backend
In cpanse/MsBackendRawFileReader: Mass Spectrometry Backend for Reading Thermo Fisher Scientific raw Files
MsBackendRawFileReader-class R Documentation
RawFileReader-based backend
Description
The 'MsBackendRawFileReader' inherits all slots and methods from the base
'MsBackendDataFrame' (in-memory) backend. It overrides the base 'mz' and
'intensity' methods as well as 'peaksData' to read the respective data from
the original raw data files.
The validator function has to ensure that the files exist and that required
column names are present.
The 'backendInitialize' method reads the header data from the raw files and
hence fills the 'spectraData' slot.
Author(s)
Christian Panse (2019-2021)
Examples
beRaw <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
files = rawrr::sampleFilePath())
beRaw
Spectra::msLevel(beRaw)
cpanse/MsBackendRawFileReader documentation built on Oct. 3, 2024, 12:19 a.m.
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| MsBackendRawFileReader-class | R Documentation |
RawFileReader-based backend
Description
The 'MsBackendRawFileReader' inherits all slots and methods from the base 'MsBackendDataFrame' (in-memory) backend. It overrides the base 'mz' and 'intensity' methods as well as 'peaksData' to read the respective data from the original raw data files.
The validator function has to ensure that the files exist and that required column names are present.
The 'backendInitialize' method reads the header data from the raw files and hence fills the 'spectraData' slot.
Author(s)
Christian Panse (2019-2021)
Examples
beRaw <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
files = rawrr::sampleFilePath())
beRaw
Spectra::msLevel(beRaw)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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