Description Usage Arguments Value
Calculation of stand-level dynamics (AGB, AWP, AWM, abundance, diameter growth, stem mortality rate) used in the tree size analysis
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 |
dbh |
A vector of numerical values, containing all dbh measurements. |
agb |
A vector of numerical values, containing all agb measurements
(same length as |
year |
A vector of numerical values, containing census years
corresponding to each measurement (same length as |
stemid |
A vector of character (or numeric) values, containing unique
stem identifiers corresponding to each measurement (same length as |
hom |
A vector of numeric values, containing height of measurement, used
to detect change in hom. Use |
wd |
A vector numeric values, containing wood density, used to (re-)calculate AGB |
size |
A vector of character values corresponding to size bins |
group |
Additional grouping, optional (default in |
plot |
A vector of character (or numeric) values, containing subplot
variable (quadrat or bigger) corresponding to each measurement (same length
as |
E |
A numerical value: environmental variable in Chave equation (2014) |
a |
A numerical vector (same size as |
b |
A numerical vector (same size as |
plot_area |
Area of subplots (in ha). Default is |
Ddbh_range |
Vector of length 2: ange of acceptable DBH change (in cm). Default is c(-Inf, Inf) (ie no correction). |
A data.table (data.frame) with the following columns: plot
and
year
and size
as provided in the function inputs; variable
: N
(abundance, N/ha), mrate
(mortality rate, %/yr), Dgrowth
(dbh growth,
cm/yr), AGB
(aboveground biomass, Mg/ha), AWP
(aboveground wood
productivity, Mg/ha/yr), , AWM
(aboveground wood mortality, Mg/ha/yr);
value
is the correponding value; dT
is the time interval between the
census and the following one (in years); weight
is the weigth that will
be used in the bootstrap function.
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