Files in crmclean/Autotuner
Automated parameter selection for untargeted metabolomics data processing

..Rcheck/00install.out
..Rcheck/Autotuner-manual.tex
..Rcheck/Autotuner/DESCRIPTION
..Rcheck/Autotuner/INDEX
..Rcheck/Autotuner/LICENSE
..Rcheck/Autotuner/Meta/Rd.rds
..Rcheck/Autotuner/Meta/data.rds
..Rcheck/Autotuner/Meta/features.rds
..Rcheck/Autotuner/Meta/hsearch.rds
..Rcheck/Autotuner/Meta/links.rds
..Rcheck/Autotuner/Meta/nsInfo.rds
..Rcheck/Autotuner/Meta/package.rds
..Rcheck/Autotuner/NAMESPACE
..Rcheck/Autotuner/R/Autotuner
..Rcheck/Autotuner/R/Autotuner.rdb
..Rcheck/Autotuner/R/Autotuner.rdx
..Rcheck/Autotuner/application/app.R
..Rcheck/Autotuner/application/autotuner_parameters.csv
..Rcheck/Autotuner/data/Rdata.rdb
..Rcheck/Autotuner/data/Rdata.rds
..Rcheck/Autotuner/data/Rdata.rdx
..Rcheck/Autotuner/help/AnIndex
..Rcheck/Autotuner/help/Autotuner.rdb
..Rcheck/Autotuner/help/Autotuner.rdx
..Rcheck/Autotuner/help/aliases.rds
..Rcheck/Autotuner/help/paths.rds
..Rcheck/Autotuner/html/00Index.html
..Rcheck/Autotuner/html/R.css
..Rcheck/tests/startup.Rs
..Rcheck/tests/testthat.R
..Rcheck/tests/testthat.Rout
..Rcheck/tests/testthat/test_Autotuner.R ..Rcheck/tests/testthat/test_loadingData.R
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/Autotuner-class.R R/EICParams.R R/TIC_params.R R/ThresholdingAlgo.R R/checkBounds.R R/checkEICFunctions.R R/checkEICPeaks.R R/data.R R/dissectScans.R R/extract_peaks.R R/findPeakWidth.R R/findTruePeaks.R R/internal.R R/isolatePeaks.R R/peak_time_difference.R R/peakwidth_est.R R/peakwidth_table.R R/plot_peaks.R R/plot_signals.R R/returnParams.R README.md
data/eicParamsEsts.rda
data/mzDb.rda
data/observedPeak.rda
inst/extdata/Autotuner.rds
inst/extdata/AutotunerObj.rds
inst/extdata/eicParamsEsts.rds
inst/extdata/header.rds
inst/script/makeAutotunerTestData.R inst/script/makeTestData.R man/Autotuner-class.Rd man/EICparams.Rd man/TIC_params.Rd man/ThresholdingAlgo.Rd man/checkBounds.Rd man/checkEICPeaks.Rd man/createAutotuner.Rd man/dissectScans.Rd man/eicParamsEsts.Rd man/estimatePPM.Rd man/estimateSNThresh.Rd man/extract_peaks.Rd man/filterPeaksfromNoise.Rd man/filterPpmError.Rd man/findPeakWidth.Rd man/findTruePeaks.Rd man/getAutoFactorCol.Rd man/getAutoFile_col.Rd man/getAutoFile_paths.Rd man/getAutoIntensity.Rd man/getAutoMetadata.Rd man/getAutoPeak_difference.Rd man/getAutoPeak_table.Rd man/getAutoPeaks.Rd man/getAutoTime.Rd man/initialize-Autotuner-method.Rd man/isolatePeaks.Rd man/mzDb.Rd man/observedPeak.Rd man/peak_time_difference.Rd man/peakwidth_est.Rd man/peakwidth_table.Rd man/plot_peaks.Rd man/plot_signals.Rd man/returnParams.Rd man/setAutoFactorCol.Rd man/setAutoFile_col.Rd man/setAutoFile_paths.Rd man/setAutoIntensity.Rd man/setAutoMetadata.Rd man/setAutoPeak_difference.Rd man/setAutoPeak_table.Rd man/setAutoPeaks.Rd man/setAutoTime.Rd tests/testthat.R tests/testthat/test_Autotuner.R tests/testthat/test_gettersSetters.R tests/testthat/test_loadingData.R tests/testthat/test_paramSummary.R
vignettes/.gitignore
vignettes/Autotuner.Rmd
crmclean/Autotuner documentation built on Jan. 23, 2021, 1:43 a.m.